This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

LiquidAssociation

This is the development version of LiquidAssociation; for the stable release version, see LiquidAssociation.

LiquidAssociation

Bioconductor version: Development (3.18)

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("LiquidAssociation")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LiquidAssociation")
LiquidAssociation Vignette PDF R Script
Reference Manual PDF

Details

biocViews CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse
Version 1.55.0
In Bioconductor since BioC 2.5 (R-2.10) (14 years)
License GPL (>=3)
Depends geepack, methods, yeastCC, org.Sc.sgd.db
Imports Biobase, graphics, grDevices, methods, stats
Linking To
Suggests
System Requirements
Enhances
URL
See More
Depends On Me fastLiquidAssociation
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LiquidAssociation_1.55.0.tar.gz
Windows Binary LiquidAssociation_1.55.0.zip (64-bit only)
macOS Binary (x86_64) LiquidAssociation_1.55.0.tgz
macOS Binary (arm64) LiquidAssociation_1.55.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/LiquidAssociation
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LiquidAssociation
Bioc Package Browser https://code.bioconductor.org/browse/LiquidAssociation/
Package Short Url https://bioconductor.org/packages/LiquidAssociation/
Package Downloads Report Download Stats