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Mfuzz

This is the development version of Mfuzz; for the stable release version, see Mfuzz.

Soft clustering of time series gene expression data

Bioconductor version: Development (3.18)

Package for noise-robust soft clustering of gene expression time-series data (including a graphical user interface)

Author: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Maintainer: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Citation (from within R, enter citation("Mfuzz")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Mfuzz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Mfuzz")
Introduction to Mfuzz PDF R Script
Reference Manual PDF

Details

biocViews Clustering, Microarray, Preprocessing, Software, TimeCourse, Visualization
Version 2.61.0
In Bioconductor since BioC 1.8 (R-2.3) (17.5 years)
License GPL-2
Depends R (>= 2.5.0), Biobase(>= 2.5.5), e1071
Imports tcltk, tkWidgets
Linking To
Suggests marray
System Requirements
Enhances
URL http://mfuzz.sysbiolab.eu/
See More
Depends On Me cycle, TimiRGeN
Imports Me Patterns, TOmicsVis
Suggests Me DAPAR, pwOmics
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Mfuzz_2.61.0.tar.gz
Windows Binary Mfuzz_2.61.0.zip
macOS Binary (x86_64) Mfuzz_2.61.0.tgz
macOS Binary (arm64) Mfuzz_2.61.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Mfuzz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Mfuzz
Bioc Package Browser https://code.bioconductor.org/browse/Mfuzz/
Package Short Url https://bioconductor.org/packages/Mfuzz/
Package Downloads Report Download Stats