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Prostar

This is the development version of Prostar; for the stable release version, see Prostar.

Provides a GUI for DAPAR

Bioconductor version: Development (3.18)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software
Version 1.33.0
In Bioconductor since BioC 3.2 (R-3.2) (8 years)
License Artistic-2.0
Depends R (>= 4.3.0)
Imports DAPAR(>= 1.31.6), DAPARdata(>= 1.27.3), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot
Linking To
Suggests BiocStyle, BiocManager, testthat, shinyTree, knitr, colourpicker, gtools, XML, R.utils, RColorBrewer, DT, shinyWidgets, sass, rclipboard
System Requirements
Enhances
URL http://www.prostar-proteomics.org/
Bug Reports https://github.com/prostarproteomics/Prostar/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/Prostar
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Prostar
Package Short Url https://bioconductor.org/packages/Prostar/
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