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Pviz

This is the development version of Pviz; for the stable release version, see Pviz.

Peptide Annotation and Data Visualization using Gviz

Bioconductor version: Development (3.18)

Pviz adapts the Gviz package for protein sequences and data.

Author: Renan Sauteraud, Mike Jiang, Raphael Gottardo

Maintainer: Renan Sauteraud <rsautera at fhcrc.org>

Citation (from within R, enter citation("Pviz")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Pviz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Pviz")
The Pviz users guide PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Proteomics, Software, Visualization
Version 1.35.0
In Bioconductor since BioC 3.0 (R-3.1) (9 years)
License Artistic-2.0
Depends R (>= 3.0.0), Gviz(>= 1.7.10)
Imports biovizBase, Biostrings, GenomicRanges, IRanges, data.table, methods
Linking To
Suggests knitr, pepDat
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me pepStat
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Pviz_1.35.0.tar.gz
Windows Binary Pviz_1.35.0.zip
macOS Binary (x86_64) Pviz_1.35.0.tgz
macOS Binary (arm64) Pviz_1.35.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Pviz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Pviz
Bioc Package Browser https://code.bioconductor.org/browse/Pviz/
Package Short Url https://bioconductor.org/packages/Pviz/
Package Downloads Report Download Stats