SPEM
This is the development version of SPEM; for the stable release version, see SPEM.
S-system parameter estimation method
Bioconductor version: Development (3.18)
This package can optimize the parameter in S-system models given time series data
Author: Xinyi YANG Developer, Jennifer E. DENT Developer and Christine NARDINI Supervisor
Maintainer: Xinyi YANG <yangxinyi at picb.ac.cn>
Citation (from within R, enter
citation("SPEM")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SPEM")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SPEM")| Vignette for SPEM | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Network, NetworkInference, Software |
| Version | 1.41.0 |
| In Bioconductor since | BioC 2.12 (R-3.0) (10.5 years) |
| License | GPL-2 |
| Depends | R (>= 2.15.1), Rsolnp, Biobase, methods |
| Imports | |
| Linking To | |
| Suggests | |
| System Requirements | |
| Enhances | |
| URL |
See More
| Depends On Me | |
| Imports Me | TMixClust |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | SPEM_1.41.0.tar.gz |
| Windows Binary | SPEM_1.41.0.zip (64-bit only) |
| macOS Binary (x86_64) | SPEM_1.41.0.tgz |
| macOS Binary (arm64) | SPEM_1.41.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/SPEM |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SPEM |
| Bioc Package Browser | https://code.bioconductor.org/browse/SPEM/ |
| Package Short Url | https://bioconductor.org/packages/SPEM/ |
| Package Downloads Report | Download Stats |