adverSCarial
This is the development version of adverSCarial; to use it, please install the devel version of Bioconductor.
adverSCarial, generate and analyze the vulnerability of scRNA-seq classifiers to adversarial attacks
Bioconductor version: Development (3.18)
adverSCarial is an R Package designed for generating and analyzing the vulnerability of scRNA-seq classifiers to adversarial attacks. The package is versatile and provides a format for integrating any type of classifier. It offers functions for studying and generating two types of attacks, min change attack and max change attack. The min change attack involves making a small modification to the input to alter the classification. The max change attack involves making a large modification to the input without changing its classification. The package provides a comprehensive solution for evaluating the robustness of scRNA-seq classifiers against adversarial attacks.
Author: Ghislain FIEVET [aut, cre] 
, Sébastien HERGALANT [aut]
Maintainer: Ghislain FIEVET <ghislain.fievet at gmail.com>
citation("adverSCarial")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("adverSCarial")For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("adverSCarial")| Vign01_adverSCarial | HTML | R Script |
| Vign02_overView_analysis | HTML | R Script |
| Vign03_adaptClassifier | HTML | |
| Vign04_advRandWalkMinChange | HTML | |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Classification, SingleCell, Software, Transcriptomics |
| Version | 0.99.47 |
| In Bioconductor since | BioC 3.18 (R-4.3) |
| License | MIT + file LICENSE |
| Depends | |
| Imports | gtools, S4Vectors, methods, DelayedArray |
| Linking To | |
| Suggests | knitr, RUnit, BiocGenerics, TENxPBMCData, CHETAH, stringr, LoomExperiment |
| System Requirements | |
| Enhances | |
| URL |
See More
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | adverSCarial_0.99.47.tar.gz |
| Windows Binary | adverSCarial_0.99.47.zip |
| macOS Binary (x86_64) | adverSCarial_0.99.47.tgz |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/adverSCarial |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/adverSCarial |
| Bioc Package Browser | https://code.bioconductor.org/browse/adverSCarial/ |
| Package Short Url | https://bioconductor.org/packages/adverSCarial/ |
| Package Downloads Report | Download Stats |