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chihaya

This is the development version of chihaya; for the stable release version, see chihaya.

Save Delayed Operations to a HDF5 File

Bioconductor version: Development (3.18)

Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

Author: Aaron Lun [cre, aut]

Maintainer: Aaron Lun <infinite.monkeys.with.keyboards at gmail.com>

Citation (from within R, enter citation("chihaya")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("chihaya")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chihaya")
User guide HTML R Script
Reference Manual PDF

Details

biocViews DataImport, DataRepresentation, Software
Version 1.1.1
In Bioconductor since BioC 3.17 (R-4.3) (< 6 months)
License GPL-3
Depends DelayedArray
Imports methods, Matrix, rhdf5, Rcpp, HDF5Array
Linking To Rcpp, Rhdf5lib
Suggests BiocGenerics, S4Vectors, BiocSingular, ResidualMatrix, BiocStyle, testthat, rmarkdown, knitr
System Requirements C++17, GNU make
Enhances
URL https://github.com/ArtifactDB/chihaya-R
Bug Reports https://github.com/ArtifactDB/chihaya-R/issues
See More
Depends On Me
Imports Me
Suggests Me alabaster.matrix
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package chihaya_1.1.1.tar.gz
Windows Binary chihaya_1.1.1.zip (64-bit only)
macOS Binary (x86_64) chihaya_1.1.1.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/chihaya
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/chihaya
Bioc Package Browser https://code.bioconductor.org/browse/chihaya/
Package Short Url https://bioconductor.org/packages/chihaya/
Package Downloads Report Download Stats