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flowPeaks

This is the development version of flowPeaks; for the stable release version, see flowPeaks.

An R package for flow data clustering

Bioconductor version: Development (3.18)

A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.

Author: Yongchao Ge<yongchao.ge at gmail.com>

Maintainer: Yongchao Ge<yongchao.ge at gmail.com>

Citation (from within R, enter citation("flowPeaks")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("flowPeaks")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowPeaks")
Tutorial of flowPeaks package PDF R Script
Reference Manual PDF
README Text

Details

biocViews Clustering, FlowCytometry, Gating, ImmunoOncology, Software
Version 1.47.0
In Bioconductor since BioC 2.11 (R-2.15) (11 years)
License Artistic-1.0
Depends R (>= 2.12.0)
Imports
Linking To
Suggests
System Requirements gsl
Enhances flowCore
URL
See More
Depends On Me
Imports Me CONFESS, ddPCRclust
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowPeaks_1.47.0.tar.gz
Windows Binary flowPeaks_1.47.0.zip (64-bit only)
macOS Binary (x86_64) flowPeaks_1.47.0.tgz
macOS Binary (arm64) flowPeaks_1.47.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowPeaks
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowPeaks
Bioc Package Browser https://code.bioconductor.org/browse/flowPeaks/
Package Short Url https://bioconductor.org/packages/flowPeaks/
Package Downloads Report Download Stats