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HelloRangesData

This is the development version of HelloRangesData; for the stable release version, see HelloRangesData.

Data for the HelloRanges tutorial vignette

Bioconductor version: Development (3.18)

Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from "Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195." The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.

Author: Michael Lawrence

Maintainer: Michael Lawrence <michafla at gene.com>

Citation (from within R, enter citation("HelloRangesData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("HelloRangesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HelloRangesData")
HelloRanges Example Data PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, SequencingData
Version 1.27.0
License GPL (>= 2)
Depends
Imports
Linking To
Suggests BiocStyle
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Depends On Me
Imports Me
Suggests Me HelloRanges, plyranges
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HelloRangesData_1.27.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/HelloRangesData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HelloRangesData
Package Short Url https://bioconductor.org/packages/HelloRangesData/
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