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ObMiTi

This is the development version of ObMiTi; for the stable release version, see ObMiTi.

Ob/ob Mice Data on Normal and High Fat Diet

Bioconductor version: Development (3.18)

The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 20 weeks in 7 tissues.

Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]

Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>

Citation (from within R, enter citation("ObMiTi")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ObMiTi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ObMiTi")
Using ObMiTi HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, ExperimentHub, GEO, RNASeqData
Version 1.9.0
License GPL-3
Depends R (>= 4.1), SummarizedExperiment, ExperimentHub
Imports
Linking To
Suggests knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat
System Requirements
Enhances
URL https://github.com/OmarElAshkar/ObMiTi
Bug Reports https://github.com/OmarElAshkar/ObMiTi/issues
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ObMiTi_1.9.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ObMiTi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ObMiTi
Package Short Url https://bioconductor.org/packages/ObMiTi/
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