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TENxBrainData

This is the development version of TENxBrainData; for the stable release version, see TENxBrainData.

Data from the 10X 1.3 Million Brain Cell Study

Bioconductor version: Development (3.18)

Single-cell RNA-seq data for 1.3 million brain cells from E18 mice, generated by 10X Genomics.

Author: Aaron Lun [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TENxBrainData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TENxBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TENxBrainData")
Exploring the 1.3 million brain cell scRNA-seq data from 10X Genomics HTML R Script
Reference Manual PDF

Details

biocViews ExperimentData, ExpressionData, RNASeqData, SequencingData, SingleCellData
Version 1.21.0
License CC BY 4.0
Depends SingleCellExperiment, HDF5Array
Imports AnnotationHub(>= 2.9.22), ExperimentHub
Linking To
Suggests knitr, BiocStyle, snow, BiocFileCache, BiocParallel, data.table, rmarkdown
System Requirements
Enhances
URL
See More
Depends On Me OSCA.advanced
Imports Me
Suggests Me HDF5Array
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TENxBrainData_1.21.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TENxBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TENxBrainData
Package Short Url https://bioconductor.org/packages/TENxBrainData/
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