This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

WES.1KG.WUGSC

This is the development version of WES.1KG.WUGSC; for the stable release version, see WES.1KG.WUGSC.

Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).

Bioconductor version: Development (3.18)

The assembled .bam files of whole exome sequencing data from the 1000 Genomes Project. 46 samples sequenced by the Washington University Genome Sequencing Center are included.

Author: Yuchao Jiang, Nancy R. Zhang

Maintainer: Yuchao Jiang <yuchaoj at wharton.upenn.edu>

Citation (from within R, enter citation("WES.1KG.WUGSC")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("WES.1KG.WUGSC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WES.1KG.WUGSC")
Using CODEX PDF
Reference Manual PDF
NEWS Text

Details

biocViews DNASeqData, ExperimentData, Homo_sapiens_Data, Project1000genomes, SequencingData
Version 1.33.0
License GPL-2
Depends
Imports
Linking To
Suggests
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me CODEX, iCNV
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package WES.1KG.WUGSC_1.33.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/WES.1KG.WUGSC
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/WES.1KG.WUGSC
Package Short Url https://bioconductor.org/packages/WES.1KG.WUGSC/
Package Downloads Report Download Stats