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derfinderData

This is the development version of derfinderData; for the stable release version, see derfinderData.

Processed BigWigs from BrainSpan for examples

Bioconductor version: Development (3.18)

Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.

Author: Leonardo Collado-Torres [aut, cre] , Andrew Jaffe [aut] , Jeffrey Leek [aut, ths]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderData")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("derfinderData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderData")
Introduction to derfinderData HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, Homo_sapiens_Data, RNASeqData
Version 2.19.0
License Artistic-2.0
Depends R (>= 3.5.0)
Imports
Linking To
Suggests sessioninfo, knitr (>= 1.6), RefManageR, rmarkdown (>= 0.3.3), BiocStyle
System Requirements
Enhances
URL https://github.com/leekgroup/derfinderData
Bug Reports https://github.com/leekgroup/derfinderData/issues
See More
Depends On Me
Imports Me
Suggests Me derfinder, derfinderPlot
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package derfinderData_2.19.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/derfinderData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/derfinderData
Package Short Url https://bioconductor.org/packages/derfinderData/
Package Downloads Report Download Stats