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sampleClassifierData

This is the development version of sampleClassifierData; for the stable release version, see sampleClassifierData.

Pre-processed data for use with the sampleClassifier package

Bioconductor version: Development (3.18)

This package contains two microarray and two RNA-seq datasets that have been preprocessed for use with the sampleClassifier package. The RNA-seq data are derived from Fagerberg et al. (2014) and the Illumina Body Map 2.0 data. The microarray data are derived from Roth et al. (2006) and Ge et al. (2005).

Author: Khadija El Amrani

Maintainer: Khadija El Amrani <khadija.el-amrani at charite.de>

Citation (from within R, enter citation("sampleClassifierData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("sampleClassifierData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sampleClassifierData")
sampleClassifierData Introduction PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ArrayExpress, ExperimentData, ExpressionData, MicroarrayData, RNASeqData, SequencingData
Version 1.25.0
License Artistic-2.0
Depends R (>= 3.5.0), SummarizedExperiment
Imports
Linking To
Suggests BiocStyle
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Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package sampleClassifierData_1.25.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/sampleClassifierData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sampleClassifierData
Package Short Url https://bioconductor.org/packages/sampleClassifierData/
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