Rnits

R Normalization and Inference of Time Series data

Bioconductor version: Release (3.17)

R/Bioconductor package for normalization, curve registration and inference in time course gene expression data.

Author: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Maintainer: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Citation (from within R, enter citation("Rnits")):

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rnits")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rnits")

R/Bioconductor package for normalization and differential expression inference in time series gene expression microarray data.	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	DifferentialExpression, GeneExpression, Microarray, Normalization, Software, TimeCourse
Version	1.34.0
In Bioconductor since	BioC 3.0 (R-3.1) (9 years)
License	GPL-3
Depends	R (>= 3.6.0), Biobase, ggplot2, limma, methods
Imports	affy, boot, impute, splines, graphics, qvalue, reshape2
Linking To
Suggests	BiocStyle, knitr, GEOquery, stringr
System Requirements
Enhances
URL

Follow Installation instructions to use this package in your R session.

Source Package	Rnits_1.34.0.tar.gz
Windows Binary	Rnits_1.34.0.zip
macOS Binary (x86_64)	Rnits_1.34.0.tgz
macOS Binary (arm64)	Rnits_1.34.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rnits
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rnits
Bioc Package Browser	https://code.bioconductor.org/browse/Rnits/
Package Short Url	https://bioconductor.org/packages/Rnits/
Package Downloads Report	Download Stats