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biocthis

Automate package and project setup for Bioconductor packages

Bioconductor version: Release (3.17)

This package expands the usethis package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.

Author: Leonardo Collado-Torres [aut, cre] , Marcel Ramos [ctb]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("biocthis")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biocthis")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocthis")
biocthis developer notes HTML R Script
Introduction to biocthis HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ReportWriting, Software
Version 1.10.3
In Bioconductor since BioC 3.12 (R-4.0) (3 years)
License Artistic-2.0
Depends
Imports BiocManager, fs, glue, rlang, styler, usethis (>= 2.0.1)
Linking To
Suggests BiocStyle, covr, devtools, knitr, pkgdown, RefManageR, rmarkdown, sessioninfo, testthat, utils
System Requirements
Enhances
URL https://github.com/lcolladotor/biocthis
Bug Reports https://support.bioconductor.org/tag/biocthis
See More
Depends On Me
Imports Me HubPub
Suggests Me tripr
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biocthis_1.10.3.tar.gz
Windows Binary biocthis_1.10.3.zip
macOS Binary (x86_64) biocthis_1.10.3.tgz
macOS Binary (arm64) biocthis_1.10.3.tgz
Source Repository git clone https://git.bioconductor.org/packages/biocthis
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biocthis
Bioc Package Browser https://code.bioconductor.org/browse/biocthis/
Package Short Url https://bioconductor.org/packages/biocthis/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive