iCheck
QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data
Bioconductor version: Release (3.17)
QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.
Author: Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb]
Maintainer: Weiliang Qiu <stwxq at channing.harvard.edu>
citation("iCheck")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("iCheck")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iCheck")
iCheck | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | DNAMethylation, DifferentialExpression, GeneExpression, Microarray, OneChannel, Preprocessing, QualityControl, Software, TwoChannel |
Version | 1.30.0 |
In Bioconductor since | BioC 3.2 (R-3.2) (8 years) |
License | GPL (>= 2) |
Depends | R (>= 3.2.0), Biobase, lumi, gplots |
Imports | stats, graphics, preprocessCore, grDevices, randomForest, affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest, scatterplot3d, utils |
Linking To | |
Suggests | |
System Requirements | |
Enhances | |
URL |
See More
Depends On Me | |
Imports Me | |
Suggests Me | |
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Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | iCheck_1.30.0.tar.gz |
Windows Binary | iCheck_1.30.0.zip |
macOS Binary (x86_64) | iCheck_1.30.0.tgz |
macOS Binary (arm64) | iCheck_1.30.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/iCheck |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/iCheck |
Bioc Package Browser | https://code.bioconductor.org/browse/iCheck/ |
Package Short Url | https://bioconductor.org/packages/iCheck/ |
Package Downloads Report | Download Stats |