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maigesPack

Functions to handle cDNA microarray data, including several methods of data analysis

Bioconductor version: Release (3.17)

This package uses functions of various other packages together with other functions in a coordinated way to handle and analyse cDNA microarray data

Author: Gustavo H. Esteves <gesteves at gmail.com>, with contributions from Roberto Hirata Jr <hirata at ime.usp.br>, E. Jordao Neves <neves at ime.usp.br>, Elier B. Cristo <elier at ime.usp.br>, Ana C. Simoes <anakqui at ime.usp.br> and Lucas Fahham <fahham at linux.ime.usp.br>

Maintainer: Gustavo H. Esteves <gesteves at gmail.com>

Citation (from within R, enter citation("maigesPack")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("maigesPack")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maigesPack")
maigesPack Tutorial PDF R Script
Reference Manual PDF

Details

biocViews Classification, Clustering, DifferentialExpression, GraphAndNetwork, Microarray, Preprocessing, Software, ThirdPartyClient, TwoChannel
Version 1.64.0
In Bioconductor since BioC 2.1 (R-2.6) (16 years)
License GPL (>= 2)
Depends R (>= 2.10), convert, graph, limma, marray, methods
Imports
Linking To
Suggests amap, annotate, class, e1071, MASS, multtest, OLIN, R2HTML, rgl, som
System Requirements
Enhances
URL http://www.maiges.org/en/software/
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maigesPack_1.64.0.tar.gz
Windows Binary maigesPack_1.64.0.zip
macOS Binary (x86_64) maigesPack_1.64.0.tgz
macOS Binary (arm64) maigesPack_1.64.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/maigesPack
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maigesPack
Bioc Package Browser https://code.bioconductor.org/browse/maigesPack/
Package Short Url https://bioconductor.org/packages/maigesPack/
Package Downloads Report Download Stats