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ANF

This is the development version of ANF; for the stable release version, see ANF.

Affinity Network Fusion for Complex Patient Clustering

Bioconductor version: Development (3.18)

This package is used for complex patient clustering by integrating multi-omic data through affinity network fusion.

Author: Tianle Ma, Aidong Zhang

Maintainer: Tianle Ma <tianlema at buffalo.edu>

Citation (from within R, enter citation("ANF")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ANF")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Clustering, GraphAndNetwork, Network, Software
Version 1.23.0
In Bioconductor since BioC 3.6 (R-3.4) (6 years)
License GPL-3
Depends
Imports igraph, Biobase, survival, MASS, stats, RColorBrewer
Linking To
Suggests ExperimentHub, SNFtool, knitr, rmarkdown, testthat
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me HarmonizedTCGAData
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary ANF_1.23.0.zip
macOS Binary (x86_64) ANF_1.23.0.tgz
macOS Binary (arm64) ANF_1.23.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ANF
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ANF
Bioc Package Browser https://code.bioconductor.org/browse/ANF/
Package Short Url https://bioconductor.org/packages/ANF/
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