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RTopper

This is the development version of RTopper; for the stable release version, see RTopper.

This package is designed to perform Gene Set Analysis across multiple genomic platforms

Bioconductor version: Development (3.18)

the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.

Author: Luigi Marchionni <marchion at jhu.edu>, Svitlana Tyekucheva <svitlana at jimmy.harvard.edu>

Maintainer: Luigi Marchionni <marchion at jhu.edu>

Citation (from within R, enter citation("RTopper")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RTopper")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTopper")
RTopper user's manual PDF R Script
Reference Manual PDF
LICENSE Text

Details

biocViews Microarray, Software
Version 1.47.0
In Bioconductor since BioC 2.9 (R-2.14) (12 years)
License GPL (>= 3) + file LICENSE
Depends R (>= 2.12.0), Biobase
Imports limma, multtest
Linking To
Suggests org.Hs.eg.db, KEGGREST, GO.db
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RTopper_1.47.0.tar.gz
Windows Binary RTopper_1.47.0.zip
macOS Binary (x86_64) RTopper_1.47.0.tgz
macOS Binary (arm64) RTopper_1.47.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RTopper
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RTopper
Bioc Package Browser https://code.bioconductor.org/browse/RTopper/
Package Short Url https://bioconductor.org/packages/RTopper/
Package Downloads Report Download Stats