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annotationTools

This is the development version of annotationTools; for the stable release version, see annotationTools.

Annotate microarrays and perform cross-species gene expression analyses using flat file databases

Bioconductor version: Development (3.18)

Functions to annotate microarrays, find orthologs, and integrate heterogeneous gene expression profiles using annotation and other molecular biology information available as flat file database (plain text files).

Author: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>

Maintainer: Alexandre Kuhn <alexandre.m.kuhn at gmail.com>

Citation (from within R, enter citation("annotationTools")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("annotationTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("annotationTools")
annotationTools: Overview PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Annotation, Microarray, Software
Version 1.75.0
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License GPL
Depends
Imports Biobase, stats
Linking To
Suggests BiocStyle
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me CoSIA
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package annotationTools_1.75.0.tar.gz
Windows Binary annotationTools_1.75.0.zip
macOS Binary (x86_64) annotationTools_1.75.0.tgz
macOS Binary (arm64) annotationTools_1.75.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/annotationTools
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/annotationTools
Bioc Package Browser https://code.bioconductor.org/browse/annotationTools/
Package Short Url https://bioconductor.org/packages/annotationTools/
Package Downloads Report Download Stats