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frmaTools

This is the development version of frmaTools; for the stable release version, see frmaTools.

Frozen RMA Tools

Bioconductor version: Development (3.18)

Tools for advanced use of the frma package.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("frmaTools")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("frmaTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frmaTools")
frmaTools: Create packages containing the vectors used by frma. PDF R Script
Reference Manual PDF

Details

biocViews Microarray, Preprocessing, Software
Version 1.53.0
In Bioconductor since BioC 2.6 (R-2.11) (13.5 years)
License GPL (>= 2)
Depends R (>= 2.10.0), affy
Imports Biobase, DBI, methods, preprocessCore, stats, utils
Linking To
Suggests oligo, pd.huex.1.0.st.v2, pd.hugene.1.0.st.v1, frma, affyPLM, hgu133aprobe, hgu133atagprobe, hgu133plus2probe, hgu133acdf, hgu133atagcdf, hgu133plus2cdf, hgu133afrmavecs, frmaExampleData
System Requirements
Enhances
URL http://bioconductor.org
See More
Depends On Me
Imports Me DeSousa2013
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package frmaTools_1.53.0.tar.gz
Windows Binary frmaTools_1.53.0.zip
macOS Binary (x86_64) frmaTools_1.53.0.tgz
macOS Binary (arm64) frmaTools_1.53.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/frmaTools
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/frmaTools
Bioc Package Browser https://code.bioconductor.org/browse/frmaTools/
Package Short Url https://bioconductor.org/packages/frmaTools/
Package Downloads Report Download Stats