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frma

This is the development version of frma; for the stable release version, see frma.

Frozen RMA and Barcode

Bioconductor version: Development (3.18)

Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("frma")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("frma")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frma")
frma: Preprocessing for single arrays and array batches PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Microarray, Preprocessing, Software
Version 1.53.0
In Bioconductor since BioC 2.6 (R-2.11) (13.5 years)
License GPL (>= 2)
Depends R (>= 2.10.0), Biobase(>= 2.6.0)
Imports Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics
Linking To
Suggests hgu133afrmavecs, frmaExampleData
System Requirements
Enhances
URL http://bioconductor.org
See More
Depends On Me
Imports Me ChIPXpress, DeSousa2013, rat2302frmavecs
Suggests Me antiProfilesData, frmaTools
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package frma_1.53.0.tar.gz
Windows Binary frma_1.53.0.zip
macOS Binary (x86_64) frma_1.53.0.tgz
macOS Binary (arm64) frma_1.53.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/frma
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/frma
Bioc Package Browser https://code.bioconductor.org/browse/frma/
Package Short Url https://bioconductor.org/packages/frma/
Package Downloads Report Download Stats