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antiProfilesData

This is the development version of antiProfilesData; for the stable release version, see antiProfilesData.

Normal colon and cancer preprocessed affy data for antiProfile building.

Bioconductor version: Development (3.18)

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("antiProfilesData")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("antiProfilesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews CancerData, ColonCancerData, ExperimentData, MicroarrayData, Tissue
Version 1.37.0
License Artistic-2.0
Depends Biobase
Imports
Linking To
Suggests frma, GEOquery, GEOmetadb
System Requirements
Enhances
URL
See More
Depends On Me
Imports Me
Suggests Me antiProfiles, epivizr, epivizrChart, messina
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package antiProfilesData_1.37.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/antiProfilesData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/antiProfilesData
Package Short Url https://bioconductor.org/packages/antiProfilesData/
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