This site is a development preview. As such the content and styling may not be final and is subject to change before going into production. To see more information about the redesign click here.

Menu

Documentation:

R / CRAN packages and documentation

Support

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

geneplotter

Graphics related functions for Bioconductor

Bioconductor version: Release (3.17)

Functions for plotting genomic data

Author: R. Gentleman, Biocore

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("geneplotter")):

Installation

To install this package, start R (version "4.3") and enter: 

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneplotter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplotter")
How to assemble a chromLocation object PDF R Script
Visualization of Microarray Data PDF R Script
Reference Manual PDF
README Text
NEWS Text

Details

biocViews Software, Visualization
Version 1.78.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 18 years)
License Artistic-2.0
Depends R (>= 2.10), methods, Biobase, BiocGenerics, lattice, annotate
Imports AnnotationDbi, graphics, grDevices, grid, RColorBrewer, stats, utils
Linking To
Suggests Rgraphviz, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
System Requirements
Enhances
URL
See More
Depends On Me HD2013SGI, Hiiragi2013, maEndToEnd
Imports Me biocGraph, DEXSeq, ENmix, MethylSeekR, RNAinteract
Suggests Me AgiMicroRna, biocGraph, Category, EnrichmentBrowser, GOstats, Single.mTEC.Transcriptomes
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneplotter_1.78.0.tar.gz
Windows Binary geneplotter_1.78.0.zip
macOS Binary (x86_64) geneplotter_1.78.0.tgz
macOS Binary (arm64) geneplotter_1.78.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/geneplotter
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneplotter
Bioc Package Browser https://code.bioconductor.org/browse/geneplotter/
Package Short Url https://bioconductor.org/packages/geneplotter/
Package Downloads Report Download Stats