org.Mm.eg.db

Genome wide annotation for Mouse

Bioconductor version: Release (3.17)

Genome wide annotation for Mouse, primarily based on mapping using Entrez Gene identifiers.

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("org.Mm.eg.db")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("org.Mm.eg.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF

Details

biocViews	AnnotationData, Mus_musculus, OrgDb, mouseLLMappings
Version	3.17.0
License	Artistic-2.0
Depends	R (>= 2.7.0), methods, AnnotationDbi(>= 1.61.0)
Imports
Linking To
Suggests	DBI, annotate, RUnit
System Requirements
Enhances
URL

Depends On Me	annotation, clariomsmousehttranscriptcluster.db, clariomsmousetranscriptcluster.db, htmg430a.db, htmg430b.db, htmg430pm.db, illuminaMousev1.db, illuminaMousev1p1.db, illuminaMousev2.db, lumiMouseAll.db, m10kcod.db, m20kcod.db, mgu74a.db, mgu74av2.db, mgu74b.db, mgu74bv2.db, mgu74c.db, mgu74cv2.db, mguatlas5k.db, mgug4104a.db, mgug4120a.db, mgug4121a.db, mgug4122a.db, mi16cod.db, mm24kresogen.db, MmAgilentDesign026655.db, moe430a.db, moe430b.db, moex10stprobeset.db, moex10sttranscriptcluster.db, mogene10stprobeset.db, mogene10sttranscriptcluster.db, mogene11stprobeset.db, mogene11sttranscriptcluster.db, mogene20stprobeset.db, mogene20sttranscriptcluster.db, mogene21stprobeset.db, mogene21sttranscriptcluster.db, mouse4302.db, mouse430a2.db, mpedbarray.db, mta10probeset.db, mta10transcriptcluster.db, mu11ksuba.db, mu11ksubb.db, Mu15v1.db, mu19ksuba.db, mu19ksubb.db, mu19ksubc.db, Mu22v3.db, Mus.musculus, mwgcod.db, nugomm1a520177.db, RnaSeqGeneEdgeRQL
Imports Me	APL, cellity, chimeraviz, chipenrich, CoSIA, debrowser, EasyCellType, eegc, EGSEA, GAPGOM, GmicR, IRISFGM, msigdb, profileplyr, Rmmquant, rTRMui, scPipe, tenXplore
Suggests Me	annotate, annotatr, APAlyzer, artMS, autonomics, CAGEfightR, CAGEWorkflow, CellTrails, chipenrich.data, chipseqDB, compEpiTools, CRISPRseek, csaw, destiny, enhancerHomologSearch, ExpHunterSuite, FELLA, fgsea, gCrisprTools, geneXtendeR, GenomicFeatures, girafe, GRaNIE, isomiRs, karyoploteR, MLP, multiGSEA, multiSight, NanoMethViz, NetSAM, NoRCE, ontoProc, Organism.dplyr, pathview, PhosR, Pigengene, ReportingTools, restfulSE, rGREAT, RnBeads, rrvgo, rTRM, simpleSingleCell, singleCellTK, spatialHeatmap, tidybulk, TimiRGeN, tricycle, ViSEAGO, vissE
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	org.Mm.eg.db_3.17.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/org.Mm.eg.db/
Package Downloads Report	Download Stats